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read S3 keys from secrets

This commit is contained in:
bpinsard 2024-03-08 15:58:58 -05:00
parent be20818528
commit 8e377aeac7
1 changed files with 3 additions and 8 deletions
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11
docker/dicom_indexer/entrypoint.sh
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@ -3,6 +3,9 @@
export CONTAINER_ID=$(basename $(cat /proc/1/cpuset)) export CONTAINER_ID=$(basename $(cat /proc/1/cpuset))
GITLAB_TOKEN_SECRET=$(cat /var/run/secrets/dicom_bot_gitlab_token 2>/dev/null) GITLAB_TOKEN_SECRET=$(cat /var/run/secrets/dicom_bot_gitlab_token 2>/dev/null)
export GITLAB_TOKEN=${GITLAB_TOKEN_SECRET:=$GITLAB_TOKEN} export GITLAB_TOKEN=${GITLAB_TOKEN_SECRET:=$GITLAB_TOKEN}
S3_ID=$(cat /var/run/secrets/s3_id 2>/dev/null)
S3_SECRET=$(cat /var/run/secrets/s3_secret 2>/dev/null)
export AWS_ACCESS_KEY_ID=${S3_ID:=$AWS_ACCESS_KEY_ID} AWS_SECRET_ACCESS_KEY=${S3_SECRET:=$AWS_SECRET_ACCESS_KEY}
export GITLAB_API_URL=https://${CI_SERVER_HOST}/api/v4 export GITLAB_API_URL=https://${CI_SERVER_HOST}/api/v4
export GIT_SSH_PORT=${GIT_SSH_PORT:=222} export GIT_SSH_PORT=${GIT_SSH_PORT:=222}
@ -23,14 +26,6 @@ fi
git config --global init.defaultBranch main git config --global init.defaultBranch main
ssh-keyscan -p ${GIT_SSH_PORT} -H ${CI_SERVER_HOST} | install -m 600 /dev/stdin $HOME/.ssh/known_hosts ssh-keyscan -p ${GIT_SSH_PORT} -H ${CI_SERVER_HOST} | install -m 600 /dev/stdin $HOME/.ssh/known_hosts
# example
# /usr/bin/storescp \
# -aet DICOM_SERVER_SEQUOIA\
# -pm\
# -od $DICOM_TMP_DIR -su ''\
# --eostudy-timeout ${STORESCP_STUDY_TIMEOUT:=60} \
# --exec-on-eostudy "python3 $DICOM_ROOT/exec_on_study_received.py #p " 2100 >> $DICOM_DATA_ROOT/storescp.log
# run whatever command was passed (storescp or python index_dicoms directly) # run whatever command was passed (storescp or python index_dicoms directly)
$@ $@